Objects of class "dnaEPICO_methylationGLM_T1" are list-based results returned by methylationGLM_T1(). They collect the prepared analysis table, fitted models, summaries, diagnostics, annotations, and optional saved files.

Structure

preparedData

Object returned by prepareMethylationGLM_T1Data().

distributionPlots

Object returned by plotMethylationGLM_T1Distributions().

modelFits

Object returned by fitMethylationGLM_T1Models().

modelSummaries

Object returned by summarizeMethylationGLM_T1Models().

significantCpGs

Object returned by collectSignificantCpGsMethylationGLM_T1().

diagnosticPlots

Object returned by plotMethylationGLM_T1Diagnostics().

annotation

Object returned by annotateMethylationGLM_T1Summaries().

savedFiles

Object returned by writeMethylationGLM_T1Outputs() when saveOutputs = TRUE, otherwise NULL.