Reference

All functions

dnamReport()

Generate a DNA methylation PDF report

estimateLC()

Run estimateLC.R

extractMake()

Copy dnaEPICO Makefile to a user directory

methylationGLMM_T1T2()

Run methylationGLMM_T1T2.R

methylationGLM_T1()

Run methylationGLM_T1.R

preprocessingMinfiEwasWater()

Run preprocessingMinfiEwasWater.R

preprocessingPheno()

Run preprocessingPheno.R

svaEnmix()

Run svaEnmix.R